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Characterizing of ITS2 secondary structures reveals the geographical differentiation of seagrass Halophila ovalis (Hydrocharitaceae) in the world

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dc.contributor.author Nguyen, Thi XuanThuy
dc.contributor.author Nguyen, Nhat Nhu Thuy
dc.contributor.author Nguyen, Trung Hieu
dc.contributor.author Nguyen, Manh Linh
dc.contributor.author Cao, Van Luong
dc.contributor.author Nguyen, Thi My Ngan
dc.contributor.author Dao, Viet Ha
dc.contributor.author Nguyen, Xuan Vy
dc.date.accessioned 2025-02-03T03:09:23Z
dc.date.available 2025-02-03T03:09:23Z
dc.date.issued 2024
dc.identifier.issn 1859-3097
dc.identifier.uri http://tvhdh.vnio.org.vn:8080/xmlui/handle/123456789/21346
dc.description.abstract The seagrass Halophila is one of the genera of Hydrocharitaceae that shows the highest number of species, with around 20 species. Among them, H. ovalis, H. major, H. minor, and H. nipponica are closely related species. It is the first time ITS2 secondary structures and their phylogenetic utility in this genus were reported worldwide. Phylogenetic analysis based on 205 bp of ITS2 showed four clades corresponding to above species. ITS2 secondary structures showed insight into Halophila ovalis from the East coast of Africa. Halophila ovalis from the East coast of Africa showed a distinct variant in Helix 1, 2, and 3 compared to the worldwide populations. Therefore, the ITS2 locus should be used as a DNA barcode for identifying Halophila species. vi,en
dc.language.iso en vi,en
dc.relation.ispartofseries Vietnam Journal of Marine Science and Technology, 24(4), 387–398. https://doi.org/10.15625/1859-3097/20455;
dc.subject Seagrass vi,en
dc.subject Halophila ovalis vi,en
dc.subject Hydrocharitaceae vi,en
dc.title Characterizing of ITS2 secondary structures reveals the geographical differentiation of seagrass Halophila ovalis (Hydrocharitaceae) in the world vi,en
dc.type Working Paper vi,en


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